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Title:Alignments of genes in the denitrification pathway
Author(s):Ma, Yanjun; Zilles, Julie L.; Kent, Angela D.
Subject(s):gene alignment
denitrification
Abstract:Using these gene alignments, we have conducted a comprehensive in silico evaluation of the specificity and coverage of published primer sets for all the commonly used diagnostic genes in the denitrification pathway using the wealth of functional gene sequence data now available. In addition, we have reevaluated the results of past studies in light of our findings on the specificity and coverage of these primer sets. This is supporting information for the manuscript "An evaluation of primers for detecting denitrifiers via their functional genes" submitted to the journal Environmental Microbiology.
Issue Date:2019
Citation Info:Ma, Yanjun, Julie L. Zilles, Angela D. Kent (2019) An evaluation of primers for detecting denitrifiers via their functional genes. Environmental Microbiology. in press.
Genre:Data
Type:Text
Language:English
URI:http://hdl.handle.net/2142/101877
Sponsor:National Institute of Food and Agriculture, U.S. Department of Agriculture, under award number 2015-67019-23584
Date Available in IDEALS:2018-10-23


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