Files in this item
Files | Description | Format |
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application/pdf ![]() | Figure from manuscript | |
application/vnd.openxmlformats-officedocument.wordprocessingml.document ![]() | Supplemental figures and text from manuscript | Microsoft Word 2007 |
text/plain ![]() | GoldenGate markers excluded from the study | Text file |
text/plain ![]() | GoldenGate markers used in the study | Text file |
text/plain ![]() | RAD-seq markers excluded from the study | Text file |
text/plain ![]() | RAD-seq markers used in the study | Text file |
text/plain ![]() | Results listed by individual | Text file |
text/plain ![]() | Description of Dataset S1 contents | Text file |
text/plain ![]() | R function for data import | Text file |
text/plain ![]() | R function for data import | Text file |
text/plain ![]() | R function for pie chart graphics | Text file |
text/plain ![]() | R script for analysis of plastid data | Text file |
text/plain ![]() | R script for tree plotting | Text file |
text/plain ![]() | Neighbor-joining tree of individuals, Newick format | Text file |
text/plain ![]() | R functions and script for choosing core germplasm sets | Text file |
text/csv ![]() | Latitude and longitude data for plots | CSV file |
text/csv ![]() | Latitude and longitude data for plots | CSV file |
text/plain ![]() | R script for SNP analysis | Text file |
text/plain ![]() | R script for SNP analysis | Text file |
text/plain ![]() | R script for SNP analysis | Text file |
text/plain ![]() | R script for SNP analysis | Text file |
text/plain ![]() | Allele data for common plastid haplotypes | Text file |
text/plain ![]() | Plastid allele data for all individuals | Text file |
text/csv ![]() | GoldenGate SNP data | CSV file |
text/plain ![]() | RAD-seq SNP data | Text file |
application/octet-stream ![]() | binary tag pair file for calling RAD-seq SNPs | Unknown |
text/plain ![]() | RAD-seq SNP data | Text file |
text/plain ![]() | Read counts for RAD-seq SNP data | Text file |
text/plain ![]() | Fasta file of RAD-tags | Text file |
text/plain ![]() | Descriptions of files | Text file |
Description
Title: | A footprint of past climate change on the diversity and population structure of Miscanthus sinensis |
Author(s): | Clark, Lindsay V.; Brummer, Joe E.; Głowacka, Katarzyna; Hall, Megan C.; Heo, Kweon; Peng, Junhua; Yamada, Toshihiko; Yoo, Ji Hye; Yu, Chang Yeon; Zhao, Hua; Long, Stephen P.; Sacks, Erik J. |
Subject(s): | Andropogoneae
bioenergy biogeography plastid microsatellite climate change Miscanthus sinensis population genetics Saccharinae single nucleotide polymorphism (SNP) RAD-seq |
Abstract: | Datasets and R scripts from: Clark LV, Brummer JE, Głowacka K, Hall MC, Heo K, Peng J, Yamada T, Yoo JH, Yu CY, Zhao H, Long SP, and Sacks EJ (2014) "A footprint of past climate change on the diversity and population structure of Miscanthus sinensis." Annals of Botany. |
Issue Date: | 2014 |
Citation Info: | Clark LV, Brummer JE, Głowacka K, Hall MC, Heo K, Peng J, Yamada T, Yoo JH, Yu CY, Zhao H, Long SP, and Sacks EJ (2014) "A footprint of past climate change on the diversity and population structure of Miscanthus sinensis." Annals of Botany. DOI: 10.1093/aob/mcu084 |
Genre: | Data |
Type: | Text Dataset / Spreadsheet Image |
Language: | English |
URI: | http://hdl.handle.net/2142/49963 |
Sponsor: | Office of Science (BER), US Department of Energy [Project ID 0017582] |
Rights Information: | Copyright 2014, the authors. This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License. |
Date Available in IDEALS: | 2014-06-30 |