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        <identifier>oai:www.ideals.illinois.edu:2142/50404</identifier>
        <datestamp>2023-07-11</datestamp>
        <setSpec>col_2142_5131</setSpec>
        <setSpec>col_2142_16341</setSpec>
        <setSpec>com_2142_5130</setSpec>
        <setSpec>com_2142_8913</setSpec>
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        <thesis xmlns="http://www.ndltd.org/standards/metadata/etdms/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:dc="http://purl.org/dc/elements/1.1/" xsi:schemaLocation="http://www.ndltd.org/standards/metadata/etdms/1.1/ http://www.ndltd.org/standards/metadata/etdms/1.1/etdms11.xsd http://purl.org/dc/elements/1.1/ http://www.ndltd.org/standards/metadata/etdms/1.1/etdmsdc.xsd">
          <dc:contributor>Marcot, Jonathan D.</dc:contributor>
          <dc:creator>Hellert, Spencer</dc:creator>
          <dc:date>2014-09-16T17:12:38Z</dc:date>
          <dc:date>2014-09-16T17:12:38Z</dc:date>
          <dc:date>2016-09-22T20:59:24Z</dc:date>
          <dc:date>2014-08</dc:date>
          <dc:date>2014-09-16</dc:date>
          <dc:date>2014-08</dc:date>
          <dc:description>Variation of phenotypic traits and covariance among them strongly controls the strength 
and direction of natural selection. 
These patterns are characterized as phenotypic covariance 
structure: the degree to which traits vary in coordinated fashion. The quantitative analysis of 
covariance structure, and particularly how it changes over evolutionary time, will reveal how 
genetic variation translates into phenotypic variation, the sources of and limits to variation, and 
ultimately a mechanistic understanding of phenotypic evolution. 
Traits may covary due to several possible intrinsic (e.g., two traits influenced by the same 
gene) or extrinsic factors (e.g., two traits of the same functional apparatus). Flight styles vary 
greatly in birds from flightless birds with little or no functional influence to strong flappers with 
great functional influence. This variation allows specific tests of the expected magnitude of 
functional influences on patterns of integration. In chapter one of this thesis, we analyzed the 
covariance structure of the fore and hind limbs of adult and embryonic chickens, ducks, and 
cowbirds to test the following evolutionary hypotheses: 1) If patterns of covariance are 
determined predominantly by intrinsic factors, but these factors evolve over time (but not in 
relation to function), closely related species will have more similar matrices than when compared 
with distantly related species, meaning the similarity of variance/covariance matrices among 
species is a function of phylogenetic “distance”; 2) If patterns of covariance are determined 
predominantly by function (i.e., natural selection for a function), functionally similar taxa will be 
more similar than would be expected given their phylogeny; 3) If patterns of covariance are 
determined by a complex relationship between intrinsic and extrinsic factors, the similarity of 
variance/covariance matrices will show no pattern with respect to phylogeny or function; 4) If 
extrinsic influence dictates ontogenetic appearance of patterns of trait covariance and this is done iii 
with the application of function during ontogeny, patterns of covariance seen in the adult birds 
will appear later in ontogeny; 5) If intrinsic influence dictates ontogenetic appearance of patterns 
of trait covariance and selection for functional ability has influenced the developmental process, 
patterns of covariance seen in the adult birds will appear early in ontogeny. 
We found that the covariance structures of adult chickens, ducks, and cowbirds do not 
differ significantly and therefore the developmental processes in the limbs of these birds are 
conserved. 
The origin of birds and associated transition to flight fundamentally changed fore- and 
hind limb function. As the forelimbs became dedicated to locomotion, the biomechanical 
requirements of powered flight likely placed substantially different selective regimes on the 
skeletal elements of the limbs. Specifically, it has been shown that the relative sizes of the 
humerus an ulna are closely related to flight style in various clades of birds. This pattern suggests 
a tight link between locomotor function and wing skeletal morphology, and potentially a 
constraint on the evolution of these elements. In contrast, non-avian theropods and flightless 
birds likely had more relaxed biomechanical constraints on these elements, and therefore the 
potential for greater evolutionary lability. 
In chapter two of this thesis, we tested whether the relationships among limb elements 
show different evolutionary dynamics in flying and flightless theropods (including birds). We 
used published databases of element lengths supplemented with measurements from the 
literature. We also constructed a composite phylogeny including theropods and both extant and 
extinct birds. Using these data and this tree, we statistically tested whether the rates and patterns 
of evolutionary correlation between the humerus and ulna differ between flying and flightless 
species. Specifically, we tested four models using a likelihood-ratio test and AIC: 1) flying and iv 
flightless theropods shared common rates and evolutionary correlations between the humerus 
and ulna, 2) different rates, but a shared correlation, 3) shared correlation, but different rates, and 
4) different rates and patterns of correlation. 
The resulting evolutionary rates seem to reflect evolution of body mass, particularly in 
non-bird flightless theropods. Flightless birds show higher evolutionary correlations I both limbs, 
which may reflect the diversity of characteristic morphologies required by different flight styles 
and hind limb functions in flying theropods.</dc:description>
          <dc:description>Item withdrawn by Mark Zulauf (zulauf@illinois.edu) on 2014-07-18T18:24:40Z
Item was in collections:
University of Illinois Theses &amp; Dissertations (ID: 1)
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          <dc:description>Embargo set by: Seth Robbins for item 50515
Lift date: 2016-09-16T17:13:01Z
Reason: Author requested closed access (OA after 2yrs) in Vireo ETD system</dc:description>
          <dc:description>Limited Restriction Lifted for Item 50515 on 2016-09-22T20:59:24Z.</dc:description>
          <dc:identifier>http://hdl.handle.net/2142/50404</dc:identifier>
          <dc:language>en</dc:language>
          <dc:rights>Copyright 2014 Spencer Hellert</dc:rights>
          <dc:subject>Covariance</dc:subject>
          <dc:subject>Theropod</dc:subject>
          <dc:subject>Flight</dc:subject>
          <dc:subject>Morphology</dc:subject>
          <dc:title>Evolutionary dynamics of avian and non-avian limb morphology</dc:title>
          <dc:type>text</dc:type>
          <degree>
            <department>School of Integrative Biology</department>
            <departmentCode>1383</departmentCode>
            <discipline>Ecol, Evol, Conservation Biol</discipline>
            <disciplineCode>5107</disciplineCode>
            <grantor>University of Illinois at Urbana-Champaign</grantor>
            <level>Thesis</level>
            <name>M.S.</name>
            <program>MS: Ecol, Evol, Cons Bio -UIUC</program>
            <programCode>10KS5107MS</programCode>
          </degree>
        </thesis>
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